BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027G03SP1|AL428775
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig852 894 0.0
3x_Contig1014 817 0.0
>3x_Contig852
Length = 2319
Score = 894 bits (451), Expect = 0.0
Identities = 451/451 (100%)
Strand = Plus / Minus
Query: 436 ataaatactgtttttgcaggcgaggcgataacggtaacgtcatggtacaatgtgaaatat 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2317 ataaatactgtttttgcaggcgaggcgataacggtaacgtcatggtacaatgtgaaatat 2258
Query: 496 gcagcgaatggtaccatacttcatgcatcaatggcgggaaatggcttcttccggaagacg 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2257 gcagcgaatggtaccatacttcatgcatcaatggcgggaaatggcttcttccggaagacg 2198
Query: 556 atggaaccgttttctgctgcgaaatatgcttgcatcgaactggtaactcgcccacaggaa 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2197 atggaaccgttttctgctgcgaaatatgcttgcatcgaactggtaactcgcccacaggaa 2138
Query: 616 ccatctcgttggatcaaattcgaatgctggttctacaatcagggaaactttccatcttac 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2137 ccatctcgttggatcaaattcgaatgctggttctacaatcagggaaactttccatcttac 2078
Query: 676 cagaaagggccttaattttggacttgttcgagttatttaagctatctgacacatattttg 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2077 cagaaagggccttaattttggacttgttcgagttatttaagctatctgacacatattttg 2018
Query: 736 ccgaagcaaaccaaatgatgttcacattggaacaatccaaaatggaaactacaaatactt 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2017 ccgaagcaaaccaaatgatgttcacattggaacaatccaaaatggaaactacaaatactt 1958
Query: 796 ctttgcaagaactagtgaaaaaggtaaagttccaccttcgcaagatattaggtgcaggcg 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1957 ctttgcaagaactagtgaaaaaggtaaagttccaccttcgcaagatattaggtgcaggcg 1898
Query: 856 taacaatgcccgatatcaccaacaggatgac 886
|||||||||||||||||||||||||||||||
Sbjct: 1897 taacaatgcccgatatcaccaacaggatgac 1867
>3x_Contig1014
Length = 3561
Score = 817 bits (412), Expect = 0.0
Identities = 412/412 (100%)
Strand = Plus / Plus
Query: 1 aactagaagaacttgttcgaaaggcaaactcactcctgataccatggggctcttccttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3138 aactagaagaacttgttcgaaaggcaaactcactcctgataccatggggctcttccttga 3197
Query: 61 aagtacatttggaaaccatttcaaaaaccatcacaaacgctcgttcgatcttactaccga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3198 aagtacatttggaaaccatttcaaaaaccatcacaaacgctcgttcgatcttactaccga 3257
Query: 121 tgcagaagcgattgtctaccaatgaagctcacatatcagcatttgaaactgcaatcagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3258 tgcagaagcgattgtctaccaatgaagctcacatatcagcatttgaaactgcaatcagtg 3317
Query: 181 cgggaaatctcactgacaccgctatcctgaagaatttcgatggatcggaggacgataaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3318 cgggaaatctcactgacaccgctatcctgaagaatttcgatggatcggaggacgataaaa 3377
Query: 241 ggttaacccaaacggaagcaatacaatctttggaacacccactctattcaaaacatatga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3378 ggttaacccaaacggaagcaatacaatctttggaacacccactctattcaaaacatatga 3437
Query: 301 aatcgacaaaattatggcaacaagagttcaacaaagttttcgttaccgggaaagcaggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3438 aatcgacaaaattatggcaacaagagttcaacaaagttttcgttaccgggaaagcaggtc 3497
Query: 361 taaaggcattattaaagaaagccggacaatgttgggacccaactgatcttta 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3498 taaaggcattattaaagaaagccggacaatgttgggacccaactgatcttta 3549
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6533
Number of Sequences: 1807
Number of extensions: 6533
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 2
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)